Public data

from Kostas lab

Rodriguez-R et al. (2015), includes references to the following material:

Name Description Files
AlkB dataset Manually curated collection of AlkB (alkane 1-monooxygenase) sequences Reference collection (FastA)
Final collection* (FastA)
Alignment* (FastA)
Gene tree* (Newick)
CYP153 dataset Manually curated collection of CYP153 (cytochrome P450 family) sequences Reference collection (FastA)
Final collection* (FastA)
NahA dataset Manually curated collection of NahA (naphthalene 1,2-dioxygenase) sequences Reference collection (FastA)
Final collection* (FastA)
ArhA dataset Manually curated collection of ArhA (PAH dioxygenase) sequences Reference collection (FastA)
Final collection* (FastA)
BBS dataset Manually curated collection of BBS (benzylsuccinyl-CoA dehydrogenase) sequences Reference collection (FastA)
Final collection* (FastA)
* Including putative genes from metagenomic assemblies.