Public data

from Kostas lab

Rodriguez-R et al. (under review), describing Nonpareil v3, includes references to the following material:

Name Description Files
Low-coverage simulation In silico-simulated dataset with low coverage. LC_sim.fa.gz (18Mb)
High-coverage simulation In silico-simulated dataset with high coverage. HC_sim.fa.gz (254Mb)
LL-autumn test data Reference and subsample datasets LL-autumn. LL_autumn.1.fasta.gz (6.6Gb)
LL-autumn-subsamples.tar.gz (18Gb)


Rodriguez-R & Konstantinidis (2014), describing Nonpareil v2, includes references to the following material:

Name Description Files
LL_1007B WGS, Lake Lanier, July 2010. FastQ 1 (2.8Gb)
FastQ 2 (2.9Gb)
Simulated metagenomes In silico simulated metagenomes used to test Nonpareil. Collection at SMARTech