Search precompiled models

§ Query a precompiled ROCker model

We maintain a curated directory of pre-compiled ROCker models that you can query with your own short reads from metagenomes or amplicons. This task can be computationally expensive, and may take several hours (or days) to complete, depending on the size of the input file.

§ Input data

Your name, a valid e-mail address, and a name to identify the job.

Please select a target model from our directory. Once you have identified the appropriate model, click on "Search Online".

Reads to analyze (metagenome or amplicon). Preferred format: Gzipped FastA.

§ ROCker options

Search parameters.

Use length correction if the reads in your metagenome vary significantly from the expected model length.