Enveomics collection

A toolbox for microbial genomics and metagenomics

FastQ.interpose.pl

Interposes sequences in FastQ format from two files into one output file. If more than two files are provided, the script will interpose all the input files.

    See source code, Artistic license 2.0.

§ References

    Rodriguez-R & Konstantinidis, 2016, PeerJ Preprints.

§ Requirements

§ Usage

FastQ.interpose.pl [opts] out_file in_file in_file [opts]

§ Arguments

Checking period
 -T integer  Sampling period for names evaluation.
Output file*
 out_file  Output FastQ file.
Input file*
 in_file  First input FastQ file.
Input file*
 in_file  Second input FastQ file.
Input file
 in_file  Any additional input FastQ files.
* Mandatory.