FastA.tag.rb
Generates easy-to-parse tagged reads from FastA files.
See source code, Artistic license 2.0.
§ References
Rodriguez-R & Konstantinidis, 2016, PeerJ Preprints.
§ Requirements
§ Usage
FastA.tag.rb --in in_file --out out_file [opts]
§ Arguments
- Input file*
--in in_file
FastA file containing the sequences.- Output file*
--out out_file
FastA file to create.- Prefix
--prefix string
Prefix to use in all IDs.- Suffix
--suffix string
Suffix to use in all IDs.- Defline
--defline
Keep the original defline after a space.- List
--list in_file
Reads a list of IDS.- Quiet
--quiet
Run quietly (no STDERR output).