Enveomics collection

FastA.filterLen.pl

Filters a multi-FastA file by length.

    See source code, Artistic license 2.0.

§ References

    Stajich et al, 2002, GRes; Rodriguez-R & Konstantinidis, 2016, PeerJ Preprints.

§ Requirements

• Perl.
• Perl library Bio::SeqIO.

§ Usage

FastA.filterLen.pl in_file integer > out_file

§ Arguments

Input file*

 in_file  Input FastA file.

Minimum length*

 integer  Minimum length to report a sequence.

Output file*

 out_file  Filtered FastA file.

* Mandatory.