BlastTab.addlen.rb
Appends an extra column to a tabular BLAST with the length of the query or the subject sequence.
See source code, Artistic license 2.0.
§ References
Rodriguez-R & Konstantinidis, 2016, PeerJ Preprints.
§ Requirements
§ Usage
BlastTab.addlen.rb --fasta in_file [opts] < in_file > out_file
§ Arguments
- Fasta*
--fasta in_file
FastA file of the query or the subject.- Subject
--subject
Use the subject column of the BLAST, by default the query column is used.If used, the input FastA must contain subject sequences.- Quiet
--quiet
Run quietly (no STDERR output).- Input file*
in_file
Input tabular BLAST file.- Output file*
out_file
Output tabular BLAST file with additional column.